The Workshop

Data

Numerical analysis:

EMMA and MATLAB

Documentation and tutorials on using MATLAB (a matrix-oriented numerical analysis tool) to analyze medical image data stored in the MINC file format, with a specific application to PET rCBF measurements.

Display:

Register

A tool for displaying transverse, sagittal and coronal slices through one or two image volumes. Designed for multi-modal registration, it allows image merging and point tagging.

Postf

Program to display images from static or dynamic volumetric data sets. It includes some simple profiling and region-of-interest operations.

Display

Dave MacDonald's visualization program that does everthing from 3D slice display to surface extraction to surface rendering (with texture mapping) to 3D region painting.

Storage:

The MINC file format

An introduction to, and technical documentation for, the standard file format developed by Peter Neelin at the MNI for storing volumetric medical imaging data.

Programming

Programming tools

An overview of some of the libraries/packages/etc. available to help with programming (and documentation)

HTML Tutorial

How to create WWW-readable documents